ZENBU-Reports: a graphical web-portal builder for interactive visualization and dissemination of genome-scale data , NAR Genomics and Bioinformatics 5 (3), lqad075 1, 2023

Establishment of experimental salivary gland cancer models using organoid culture and patient-derived xenografting , Cellular Oncology 46 (2), 409-421, 2023

Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types , Cell reports 41 (13), 12, 2022

Single-cell transcriptomes underscore genetically distinct tumor characteristics and microenvironment for hereditary kidney cancers , Iscience 25 (6), 2022

Combined inhibition of XIAP and BCL2 drives maximal therapeutic efficacy in genetically diverse aggressive acute myeloid leukemia, Nat Cancer 2 (3), 340-356, 2021

FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs, Nuc Acid Res 49 (D1), D892-D898, 2021

Functional annotation of human long noncoding RNAs via molecular phenotyping,
Genome Res 30 (7), 1060-1072, 2020

An atlas of human long non-coding RNAs with accurate 5′ ends, Nature 543 (7644), 199-204, 2017

A draft network of ligand–receptor-mediated multicellular signalling in human.
Nat Commun 6(1), 1-12, 2015

A promoter-level mammalian expression atlas. Nature 507 (7493), 462-470, 2014